PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88180.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 236aa    MW: 26067.7 Da    PI: 7.5771
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88180.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.4e-1081127554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +  rE+ RRd++N++f eL ++l +    + +K++Ka iL  Av+ + +L
  PON88180.1  81 KACREKMRRDKLNDRFLELGSILDPG---RPPKMDKAVILGDAVRMVTQL 127
                 678**********************8...89**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MGSVGNPNWV FDYSLIEDLG VPGGDLPSLE PPGFTWPSHS FTAQTDLSVE FDESFAKDDG  60
LKETGSRKRV RPGSCSASGS KACREKMRRD KLNDRFLELG SILDPGRPPK MDKAVILGDA  120
VRMVTQLRKE SQKLKESNES LQEKIHELKV EKNELRDEKQ RLKAEKDILD KQVKALNTQP  180
SFMHPPGIAA PFSSPGQVVG GKLVPFVGYP GISMWQFMPP AAVDTSQDHV LRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.13e-88bHLH family protein