PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88194.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 144aa    MW: 15515.5 Da    PI: 10.5528
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88194.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.32.4e-193266135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C+ CgttkTplWR gp g+k+LCnaCG++ rkk++
  PON88194.1 32 CADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 66
                ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MLDQSDKRSD SEDMSSKNPS GVSSEESHKK TCADCGTTKT PLWRGGPAGP KSLCNACGIR  60
SRKKRRAILG LNKGSSDDRK AKRSGNNGGS SNSKLGDGLK QRLLALGREV LMQRSTVERQ  120
RKKLGEEEQA AVLLMALSYG SVYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-52GATA family protein