PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON88198.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

ARR-B

Protein Properties

Length: 664aa MW: 72539.6 Da PI: 5.9861

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON88198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.6	1.4e-28	207	260	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl PON88198.1 207 KPRVVWSVELHQQFVGAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 260 79*****************.******************************8 PP
2	Myb_DNA-binding	39.4	1.3e-12	209	259	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ PON88198.1 209 RVVWSVELHQQFVGAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 259 678***********************************************7 PP
3	Response_reg	76.4	1e-25	29	137	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+++l+ y ev+ + +e al+ll+e++ +D+++ D+ mp+mdG++ll+ i e +lp+i+++a + ++ + + + Ga PON88198.1 29 VLVVDDDPTCLMILEKMLRTCLY-EVTKCNRAEHALKLLREHKngFDVVISDVHMPDMDGFKLLECIGLEM-DLPVIMMSADDGKNVVMKGVTHGAC 123 89*******************.***********999999******************6654.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +e+l + PON88198.1 124 DYLIKPVRIEALKN 137 ********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence
MNLSNGKGSM STSTSGAGVS DQFPVGLRVL VVDDDPTCLM ILEKMLRTCL YEVTKCNRAE 60 HALKLLREHK NGFDVVISDV HMPDMDGFKL LECIGLEMDL PVIMMSADDG KNVVMKGVTH 120 GACDYLIKPV RIEALKNIWQ HVVRKKKNEW REIEQSGSVE EGDRLAKPSE EADYSSSANE 180 GNWKSSKKRK DEEEEGDERD DTSTLKKPRV VWSVELHQQF VGAVNQLGID KAVPKKILEL 240 MNVPGLTREN VASHLQKYRL YLRRLSGQHQ TSLNNSFMSP QDATFGPMTS LNGIDLQTLA 300 VTGQLPAQSL ATLQAAGLGR STAKSGIPLP LIDQRNLFSF ENPKLRFGEG QQQHLNNNKP 360 VNLLHGIPTS MEPKQLTNLH QSAQSLGMNM QVNPHGAQNS PLLMQMAQPQ SRGPILNESA 420 GGHVPRLPSS VTQPIVTSGV ASGVLGRNGI ADNGRGAGYN PVLQNSSMLN YPLNQTSELP 480 GNSFPLGNPP SISGLTSKGA FPDEVNSEIK GSAGFVPSYD IFNDLNQHKS NDWDLQNVGL 540 TFDASRQSNN LQGSLDLVHQ GFSGSQRSIQ GRNQSNVGKA MFALGDTDHV NSQNITQNLN 600 PLLGDNSIRV KAERIPDVGT ESSFFPEQFG QDDLMSALLK QQEGIAPAEN QFDFDGYSLD 660 NIPV

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence

MNLSNGKGSM STSTSGAGVS DQFPVGLRVL VVDDDPTCLM ILEKMLRTCL YEVTKCNRAE  60
HALKLLREHK NGFDVVISDV HMPDMDGFKL LECIGLEMDL PVIMMSADDG KNVVMKGVTH  120
GACDYLIKPV RIEALKNIWQ HVVRKKKNEW REIEQSGSVE EGDRLAKPSE EADYSSSANE  180
GNWKSSKKRK DEEEEGDERD DTSTLKKPRV VWSVELHQQF VGAVNQLGID KAVPKKILEL  240
MNVPGLTREN VASHLQKYRL YLRRLSGQHQ TSLNNSFMSP QDATFGPMTS LNGIDLQTLA  300
VTGQLPAQSL ATLQAAGLGR STAKSGIPLP LIDQRNLFSF ENPKLRFGEG QQQHLNNNKP  360
VNLLHGIPTS MEPKQLTNLH QSAQSLGMNM QVNPHGAQNS PLLMQMAQPQ SRGPILNESA  420
GGHVPRLPSS VTQPIVTSGV ASGVLGRNGI ADNGRGAGYN PVLQNSSMLN YPLNQTSELP  480
GNSFPLGNPP SISGLTSKGA FPDEVNSEIK GSAGFVPSYD IFNDLNQHKS NDWDLQNVGL  540
TFDASRQSNN LQGSLDLVHQ GFSGSQRSIQ GRNQSNVGKA MFALGDTDHV NSQNITQNLN  600
PLLGDNSIRV KAERIPDVGT ESSFFPEQFG QDDLMSALLK QQEGIAPAEN QFDFDGYSLD  660
NIPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	0.0	ARR-B family protein