PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88232.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 308aa    MW: 34424.5 Da    PI: 6.7919
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88232.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.93.9e-21105154255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+G+r+++ +g+W+AeIrdp     + +r++lg++ taeeAa+a+++a+k+++g
  PON88232.1 105 VYRGIRQRP-WGKWAAEIRDPQ----KgARVWLGTYNTAEEAARAYDEAAKRIRG 154
                 69*******.**********94....35************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MCGGAIISDF VAVKRGRKLT PKDLWSELDT ISDLLGIDHG YSSNATSTTN TTKDYHHVAP  60
PQKLPKPPNN VVNDKKAQKL KSRVREEGEG NNDIKSTPPR TRKNVYRGIR QRPWGKWAAE  120
IRDPQKGARV WLGTYNTAEE AARAYDEAAK RIRGDKAKLN FTTTKQQQPS SGSGSAPAPA  180
PAQPPPFKKQ CVVPELTQPS YIHTTRALSS YVTPYNYPML DSNVTEDDQF YCCKSELEQP  240
SEMELKEQLS SLESLLGLEP EVQLSRLSGS GELGEEEEET ESVGLWMLDD VVTHHQQQQV  300
LQRGQLLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.14e-37ERF family protein