PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON88286.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB_related

Protein Properties

Length: 1235aa MW: 138428 Da PI: 8.9312

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON88286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.2	4.4e-09	145	180	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++ E e++++a +++G++ Wk++a + +R+++++ PON88286.1 145 QWSKKELERFYEAYRKYGKD-WKKVATIIR-NRSAEMV 180 6***************99.*****.*9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1235 aa Download sequence
MPSNCHSSSS SSSSSSSSIS TDLIIITIII VIVTTNSIAA LLDRSTSQNV EAILIGFLLS 60 VWLLRKFRIE PERLRNFEDL ILIWLVSMLS FDGTLRKFVM APSRKSRNGN KRFSSVNEVS 120 PNKRGGNANK SRQKKRKLSD MLGPQWSKKE LERFYEAYRK YGKDWKKVAT IIRNRSAEMV 180 EALYSMNRAY LSLPEGTASV VGLVAMMTDH YCILGVSDSD QESSEAGGEF REPQKRTRGK 240 FQNSTYKGSE GHLPDFSQSN SVGTRDGCLS LLKKRRSGII PHAVRKRTPR INVPYADKDN 300 SEKYHLKLNI DASNDDVAHE IMALTEASKR NGSPQVSQMP NRKVKAATLS PLRDGGRRCA 360 APEMTSGKLC STEFHDGGSE LSLQSTEVVN GDYDRTKSYL MGRESAATED SQEKGGKNYH 420 VKKVEVEDGV NYCLDDVKEA YVGRGERKQN AVKRRIRTEV VNESPRSLSK GSGKRSRKSL 480 FGGDEDSPFG ALQALADLSL MMPEEIADTV SVVEDTASRA SKLVKAKGDT CESNAGIQKR 540 KQKFLTSQLQ IYENELQADA HRSDNQKIEA TDEAKMFVRK GKRSSHNSSS LQQKLVKPLD 600 LTSSDAIYKG KVNDSVLLTT EVPPVNQLNI PTKSRSRRKT DKLKSLITKD MKKFEKVLDD 660 QPNLRIPLFR DTGVNLKEAL SNCLSQYQVR RWCAFEWFYS AIDYPWFAKS EFVEYLNHVG 720 LGHVSRLTRV EWSVIRSSLG RPRRFSKNFL KEEKEKLNQY RESVRTRYAE LRAGTKEGLP 780 TDLARPLSVR QHVVAIHPRT REIQDGTVLT VDDSRYHVQF DRPDLGVEYV MDIDCMPLNP 840 MENMPASLTS HNFVVNNPFV TFNVLKINEH LKEGKTDEYI KVASSENIDN ADNHYLFPST 900 HDIGEELRHK EGDSLHSRVQ AKFGPCETTT QSKANPQPSL LARIRAKEAD VQALTELTRA 960 LDKKEAVVFE LRHMNDEVLE NQKDGGSSLR NSESFKKQYA AVLLQLNEVN EQVSSALLCL 1020 RKRNTYQGIS PATLSYPLST LNDPDGRSSC LRFSAYNTQE CGSQVAEIVE SSKIKARKVV 1080 GAAMQAMSSL EKMGNKLETI EEAMDFVNDQ LSEEDFDMPA VRSSTYRDKV KANSEEFPGA 1140 SIPLATCRTP DSELNGLPNQ SELKALSELI ADCVATAFMI RSCTERQFPP AEVAQVLDSA 1200 VTSLHPLCPQ NLPVYEDLLK LMGIIRTQIL ALIPA

Sequence ? help Back to Top

Protein Sequence Length: 1235 aa Download sequence

MPSNCHSSSS SSSSSSSSIS TDLIIITIII VIVTTNSIAA LLDRSTSQNV EAILIGFLLS  60
VWLLRKFRIE PERLRNFEDL ILIWLVSMLS FDGTLRKFVM APSRKSRNGN KRFSSVNEVS  120
PNKRGGNANK SRQKKRKLSD MLGPQWSKKE LERFYEAYRK YGKDWKKVAT IIRNRSAEMV  180
EALYSMNRAY LSLPEGTASV VGLVAMMTDH YCILGVSDSD QESSEAGGEF REPQKRTRGK  240
FQNSTYKGSE GHLPDFSQSN SVGTRDGCLS LLKKRRSGII PHAVRKRTPR INVPYADKDN  300
SEKYHLKLNI DASNDDVAHE IMALTEASKR NGSPQVSQMP NRKVKAATLS PLRDGGRRCA  360
APEMTSGKLC STEFHDGGSE LSLQSTEVVN GDYDRTKSYL MGRESAATED SQEKGGKNYH  420
VKKVEVEDGV NYCLDDVKEA YVGRGERKQN AVKRRIRTEV VNESPRSLSK GSGKRSRKSL  480
FGGDEDSPFG ALQALADLSL MMPEEIADTV SVVEDTASRA SKLVKAKGDT CESNAGIQKR  540
KQKFLTSQLQ IYENELQADA HRSDNQKIEA TDEAKMFVRK GKRSSHNSSS LQQKLVKPLD  600
LTSSDAIYKG KVNDSVLLTT EVPPVNQLNI PTKSRSRRKT DKLKSLITKD MKKFEKVLDD  660
QPNLRIPLFR DTGVNLKEAL SNCLSQYQVR RWCAFEWFYS AIDYPWFAKS EFVEYLNHVG  720
LGHVSRLTRV EWSVIRSSLG RPRRFSKNFL KEEKEKLNQY RESVRTRYAE LRAGTKEGLP  780
TDLARPLSVR QHVVAIHPRT REIQDGTVLT VDDSRYHVQF DRPDLGVEYV MDIDCMPLNP  840
MENMPASLTS HNFVVNNPFV TFNVLKINEH LKEGKTDEYI KVASSENIDN ADNHYLFPST  900
HDIGEELRHK EGDSLHSRVQ AKFGPCETTT QSKANPQPSL LARIRAKEAD VQALTELTRA  960
LDKKEAVVFE LRHMNDEVLE NQKDGGSSLR NSESFKKQYA AVLLQLNEVN EQVSSALLCL  1020
RKRNTYQGIS PATLSYPLST LNDPDGRSSC LRFSAYNTQE CGSQVAEIVE SSKIKARKVV  1080
GAAMQAMSSL EKMGNKLETI EEAMDFVNDQ LSEEDFDMPA VRSSTYRDKV KANSEEFPGA  1140
SIPLATCRTP DSELNGLPNQ SELKALSELI ADCVATAFMI RSCTERQFPP AEVAQVLDSA  1200
VTSLHPLCPQ NLPVYEDLLK LMGIIRTQIL ALIPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein