PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON88297.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NF-YB

Protein Properties

Length: 191aa MW: 21724.5 Da PI: 6.9107

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON88297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	163.9	2.2e-51	58	152	3	97
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +++r+lPianv+rimk++lP nakisk+aket+qecvsef+sfvt+easdkc++e+rkt+ngdd++wala lGf+dy+ p+k yl++yrele ++ PON88297.1 58 QEQRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFVSFVTGEASDKCRKERRKTVNGDDVCWALAALGFDDYAGPMKRYLHRYRELEIDR 152 5789***************************************************************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MYIYTICSSS STMYCSYFFS LQYLIWRTNM VDNNNNITGA AGSSKINGSE GVIKSLDQEQ 60 RLLPIANVGR IMKQILPPNA KISKEAKETM QECVSEFVSF VTGEASDKCR KERRKTVNGD 120 DVCWALAALG FDDYAGPMKR YLHRYRELEI DRAIQEKARS SAQANHNLRL NEDDHHLRRS 180 IDDVNDGTEV I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	3e-55	NF-YB family protein