PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88584.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 263aa    MW: 28173.1 Da    PI: 4.6935
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88584.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.8e-1860108254
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                  y+GVr ++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++
  PON88584.1  60 IYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAALAIK 108
                 69****998.**********843...6**********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MSNTSPDESS TNSSSPSPSS SSSSSSSSSR IMLHTHSKKI KKMLKTRNSS ECTSTSKHPI  60
YRGVRMRSWG KWVSEIREPR KKSRIWLGTF ATPEMAARAH DVAALAIKSA NSAVLNFPTL  120
ADSLPRPASL APRDIQAAAA EAAAMVVLDA NSTKNTTTSL SSSSSSSSSS SNDDSESEDL  180
GEIVELPNIE DTTFESGESR SEFMLVDSVD GWVYEYPPLL GLEQLAHGDG GAELFYGEFS  240
DQILAAETLV PSDAIEGLVL WSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-46ERF family protein