PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88651.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family FAR1
Protein Properties Length: 260aa    MW: 29174.7 Da    PI: 6.6826
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88651.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR189.74e-2896183291
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 fYn+YA+++GF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH H+l+p
  PON88651.1  96 FYNAYATRIGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHAHPLTP 183
                 ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MGETAIDPVE FGVDGDVNGE VLRSSAEVET SRGGEENETG GSSVEGAFQQ DHDEKMNQDS  60
PGGDMIPVGV PTTSLVPADE PYVGQEFDSE AAAHAFYNAY ATRIGFIIRV SKLSRSRRDG  120
TAIGRALVCN KEGYRMPDKR EKIVRQRAET RVGCRAMILV RKVSSGKWVV TKFVKEHAHP  180
LTPGKGRRDC IYDQYPNEHD KIRELSQQLA VEKKRAATYK RHLELIFEHI EEHNESLSKK  240
IQHIVDSVKD VEMKEQQGHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.25e-92FAR1 family protein