PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON88661.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

FAR1

Protein Properties

Length: 201aa MW: 22914.9 Da PI: 9.8068

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON88661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.6	1e-18	41	124	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA++ GF +r+ +s+ks+r+g+i++r + C g +e+++k + +++ +r C+a++ +k+e+ g w+v k++ eHnH+l+ PON88661.1 41 FYDDYARQKGFLTRVLSSRKSERDGSIISRGLGCR--GLPESRTKI---QAQKQCRQRDVCTAMILLKRENPGSWVVRKFVGEHNHPLV 124 9*******************************6..666666655...6688899999**************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MGDGNGAVET YGGESSAHEG GSDIEPNEGM LFQSEEAARA FYDDYARQKG FLTRVLSSRK 60 SERDGSIISR GLGCRGLPES RTKIQAQKQC RQRDVCTAMI LLKRENPGSW VVRKFVGEHN 120 HPLVVQLQKS RRILDDKDKK IQELTSELRV KKRLSAAYRE QLLAIMKDVE EHNGHVSNKV 180 QLVYENLRKL EAKRQEHLRH S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	1e-56	FAR1 family protein