PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88662.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family FAR1
Protein Properties Length: 245aa    MW: 28821.4 Da    PI: 8.1051
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88662.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.43.7e-2674165191
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 +fY+ Y++++GF++r++++++s ++++i+ r+fvCskeg+r+e+  +  +k  ++r ++r gC+ ++++  ++ gkw+++ +++eHnHel+p
  PON88662.1  74 EFYEMYGRRMGFTIRNNRTRRSLKDNSIIGREFVCSKEGFRSEKCAHrVKKILSSRLTNREGCNSMMRIAAKNGGKWVIYGFVKEHNHELNP 165
                 6*****************************************9988834555679999*******************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MASTSDLGFN SNRNYRRWLD ETFDGHETAD DELSDTLHGR DDMIQPSTQS FSSAFEPLEP  60
IVGMEFDSAE SAREFYEMYG RRMGFTIRNN RTRRSLKDNS IIGREFVCSK EGFRSEKCAH  120
RVKKILSSRL TNREGCNSMM RIAAKNGGKW VIYGFVKEHN HELNPSKIPP RRSHRITFSE  180
DEKDLKIREL STELHRERKK SAAYQEQLQI VWRYIEEHTQ KLSLKVEMVT KNMRELEAEE  240
QQFIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.19e-46FAR1 family protein