PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88664.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family FAR1
Protein Properties Length: 201aa    MW: 23101.4 Da    PI: 6.5068
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88664.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.51.7e-2683173190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fY eYAk++GF++r+++ ++s +n  i+ r+fvCs+eg+r+++++  +++     +r++tr gCka++++  ++ +kw+vtk++ eH+H+l+
  PON88664.1  83 DFYYEYAKRMGFTIRTNRIRHSLKNMAIIGRDFVCSREGFRSSKHTLrKDR--VlpPRPVTREGCKAMIRLAAREGEKWVVTKFVREHSHKLM 173
                 6******************************************99882233..2459**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MTGSTCGHEF LDSDGVSEDE TFKRFHENEV MELVEDEPLS SCNLNNVITD GFIPMELPVE  60
GSGAECFEPY TGMSFLSLDD ARDFYYEYAK RMGFTIRTNR IRHSLKNMAI IGRDFVCSRE  120
GFRSSKHTLR KDRVLPPRPV TREGCKAMIR LAAREGEKWV VTKFVREHSH KLMTNCKFPG  180
ELPIVNILSE VCWSTNRSYL I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-26FAR1 family protein