PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON88829.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

ARR-B

Protein Properties

Length: 701aa MW: 76508.6 Da PI: 6.0852

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON88829.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	82.3	5.3e-26	208	261	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr++W+peLH++Fv av++L ekA+Pk+il+lm+ +gLt+e+v+SHLQkYRl PON88829.1 208 RPRVVWSPELHRKFVAAVHSL-TLEKAVPKKILDLMNEEGLTRENVASHLQKYRL 261 59*****************.9*****************************8 PP
2	Myb_DNA-binding	37	7.9e-12	210	260	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v av+ l + +k+I m+ +g+t++++ s++qky+ PON88829.1 210 RVVWSPELHRKFVAAVHSLTLEkaVPKKILDLMNeEGLTRENVASHLQKYR 260 678***************99**************************7 PP
3	Response_reg	83.9	4.8e-28	23	131	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vdD+p+ +++l+++l+k +y +v+++ ++ +al++l+e++ +Dl++ D++mp+mdG++ll+ e++lp+i+++ah++ +++ + + Ga PON88829.1 23 VLAVDDDPICLKVLETLLRKCQY-QVTTTNQAIKALKILRESRnkFDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMLSAHSDTKLVMKGITHGAV 117 799******************.***********999999***************87754.558******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +eel + PON88829.1 118 DYLLKPVRIEELKN 131 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MTVEDQRGGE DGAFDRFPVG MRVLAVDDDP ICLKVLETLL RKCQYQVTTT NQAIKALKIL 60 RESRNKFDLV ISDVNMPDMD GFKLLELVGL EMDLPVIMLS AHSDTKLVMK GITHGAVDYL 120 LKPVRIEELK NIWQHVVRRK KLDPKDQSNS QEKACHEAGE GGKGLASTGY LDSNAKLNKK 180 RKDQGDDEEE GSEDSETENE DPSTTQKRPR VVWSPELHRK FVAAVHSLTL EKAVPKKILD 240 LMNEEGLTRE NVASHLQKYR LYLKRISTEP TQQASMIAAL GGKDSSYMRM GTLDGFGDLQ 300 ALTGSGRLSN TPLSSYTHGG MLSRLNSPAG LTLRGISSTG LIQPGNPQNF KSFNTLGKFQ 360 RSMSANQSAS LFQGIPASLE LNKFQQTKST TYIGEFSALN NPTGFAVPAS FPDIRVTVGN 420 SGIVSNSSST PLILQPNPQQ THCRGALGSQ SSVRVTPLHS ESFDHGISGS SNFLDHNRCN 480 ESWQVAVQSS KFPSTALPMS EPSNRGQMHS NDLGISSTST QIGNNPNDIS SASAFLAPLA 540 DSRNVQGQDG LIGNIVQTTN YRVNQGWDGQ TKNYNPNLNQ NFGASSSLVS SNTTMDSINQ 600 GLGQKGTVCS ENFNRSILDQ LNGCTSSVYG TSEIEKSVIG TKIGSSEDYF LSQAKAQDAF 660 IQKNYESLDD IMTAMMKQEQ NETILMDGEF GFDTYSLGSC I

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MTVEDQRGGE DGAFDRFPVG MRVLAVDDDP ICLKVLETLL RKCQYQVTTT NQAIKALKIL  60
RESRNKFDLV ISDVNMPDMD GFKLLELVGL EMDLPVIMLS AHSDTKLVMK GITHGAVDYL  120
LKPVRIEELK NIWQHVVRRK KLDPKDQSNS QEKACHEAGE GGKGLASTGY LDSNAKLNKK  180
RKDQGDDEEE GSEDSETENE DPSTTQKRPR VVWSPELHRK FVAAVHSLTL EKAVPKKILD  240
LMNEEGLTRE NVASHLQKYR LYLKRISTEP TQQASMIAAL GGKDSSYMRM GTLDGFGDLQ  300
ALTGSGRLSN TPLSSYTHGG MLSRLNSPAG LTLRGISSTG LIQPGNPQNF KSFNTLGKFQ  360
RSMSANQSAS LFQGIPASLE LNKFQQTKST TYIGEFSALN NPTGFAVPAS FPDIRVTVGN  420
SGIVSNSSST PLILQPNPQQ THCRGALGSQ SSVRVTPLHS ESFDHGISGS SNFLDHNRCN  480
ESWQVAVQSS KFPSTALPMS EPSNRGQMHS NDLGISSTST QIGNNPNDIS SASAFLAPLA  540
DSRNVQGQDG LIGNIVQTTN YRVNQGWDGQ TKNYNPNLNQ NFGASSSLVS SNTTMDSINQ  600
GLGQKGTVCS ENFNRSILDQ LNGCTSSVYG TSEIEKSVIG TKIGSSEDYF LSQAKAQDAF  660
IQKNYESLDD IMTAMMKQEQ NETILMDGEF GFDTYSLGSC I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-121	ARR-B family protein