PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88890.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 242aa    MW: 27338 Da    PI: 8.2264
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88890.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.55.6e-1477129155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++ +hn+ Er RR++iN  ++ Lr+llP a   + kKls  ++  ++ +YI +Lq
  PON88890.1  77 KKLSHNASERDRRKKINCLYSSLRSLLPAA--DQMKKLSNPATISRTLKYIPELQ 129
                 6789*************************6..49999***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MLALYAPSPS AINGMAFDQE YRTNDLADSS PFHHLDLPCL QQQQQQQQQL QLLQGEVAEL  60
DPSPPSTAVT GDPTIIKKLS HNASERDRRK KINCLYSSLR SLLPAADQMK KLSNPATISR  120
TLKYIPELQN QVQGLIQKKE ELLSSISRKV DLIYQERHKK SSAWRSLSNV SASRLNDREL  180
VLQISTFKVQ KTPLSHILVD LEEDGFSLLN ATSFESFGGR VFYSLHLQVE RITDTKGTNN  240
FE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-57bHLH family protein