PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON88940.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 273aa    MW: 30341.4 Da    PI: 4.7124
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON88940.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.8e-1896145355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr ++ +g+++AeIrd + ng   r++lg+f+ta  Aa a+++a+ +++g
  PON88940.1  96 YRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFDTAAAAALAYDQAAFAMRG 145
                 9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MDSSSFIRPY PNSDQFSSDD HWCSPVNSLE SLSWDHINDF DVPDLPFIND NYTEKESLLT  60
TTTSTTTTTC SNKDDQGANS KAAEEEKNIT KEEVSYRGVR KRPWGKYAAE IRDSTRNGVR  120
VWLGTFDTAA AAALAYDQAA FAMRGSLAVL NFPAEKVGES LREIKYYRSS SSDDGQGCSP  180
VLALKRSHSM INNTTKVAAA SKKKKENNNN KKKVVVNYIK GTNTRMLDID YEDHENVVVL  240
EDLGPEYLEE LLSISDDRTT SIESTSSSSD VLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-41ERF family protein