PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON89007.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 200aa    MW: 21822.2 Da    PI: 8.3865
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON89007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-18555155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                ++++GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a+  ++g
  PON89007.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEDAARAYDEAAVLMNG 55
                59*******9.**********8.....334*********************977765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MVQTKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE DAARAYDEAA VLMNGRNAKT  60
NFPLPQTSEQ DSSSKGALSE VLKSKLRRCG GKTPSSRSVT CLRLDTETRC IGVWQKRGGG  120
GGGGGGRGQC SDDDHHDKNS KWVLTFELGG SGGGQCGQSG CSSESTSPAA FEEEGSSIRS  180
TQEEENRVAL QMIEELLNMN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117127RGGGGGGGGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.19e-49ERF family protein