PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON89471.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 383aa MW: 44469.4 Da PI: 6.6276

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON89471.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.5	8.9e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv++yL++kv++++++l +vik+vd+yk+ePwdL++ k+ +ee+ ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+++s k PON89471.1 7 VPPGFRFHPTDEELVDYYLRRKVNSRRFDL-DVIKDVDLYKIEPWDLQElcKIGSEEQsEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAIYS-K 103 69**************************.9***********954555554445**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 + l+g++ktLvfykgrap+g+k+dW+mheyrle PON89471.1 104 HDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 899**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MNALSHVPPG FRFHPTDEEL VDYYLRRKVN SRRFDLDVIK DVDLYKIEPW DLQELCKIGS 60 EEQSEWYFFS HKDKKYPTGT RTNRATVAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETNEN GTPQEEGWVV CRVFKKKIAT SSMRRVSEHE SPCWYDDQVS 180 FMPDLESPKH NSTTNIVVSH NLANNYQLLP YPDCKKEQLV DHHHHHLPYQ LLPHDHFLPL 240 LENPKVLLQS AATATTSSSL VLNHNAAALQ SSITLRSSQD DHDQQVQQPH DDHHQNFHAL 300 VYGNNNSSNN TNDHHQQPGM DDHDDQLTDW RVLDKFVASQ LSHEDHHVIS KENVIVRHWE 360 KQEVVPETAS TSTSASCPME LWK

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MNALSHVPPG FRFHPTDEEL VDYYLRRKVN SRRFDLDVIK DVDLYKIEPW DLQELCKIGS  60
EEQSEWYFFS HKDKKYPTGT RTNRATVAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEN GTPQEEGWVV CRVFKKKIAT SSMRRVSEHE SPCWYDDQVS  180
FMPDLESPKH NSTTNIVVSH NLANNYQLLP YPDCKKEQLV DHHHHHLPYQ LLPHDHFLPL  240
LENPKVLLQS AATATTSSSL VLNHNAAALQ SSITLRSSQD DHDQQVQQPH DDHHQNFHAL  300
VYGNNNSSNN TNDHHQQPGM DDHDDQLTDW RVLDKFVASQ LSHEDHHVIS KENVIVRHWE  360
KQEVVPETAS TSTSASCPME LWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-113	NAC family protein