PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON89621.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 237aa MW: 27206.7 Da PI: 7.9589

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON89621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	43.9	7.6e-14	2	72	59	128
NAM 59 yfFskrdkkya.tgkrknratksgyWk.atgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 fF++r++ky +g+r++ +gyWk a+ ++k++++ + ++g ++L++y+g ++++ +ktdW+m eyr+ PON89621.1 2 CFFTQRNHKYYlKGSRTKN-SGHGYWKlASQSEKPIKK-ANCTIGFIRSLIYYRGnKTKHETKTDWIMYEYRV 72 6999999998835666666.688**66666777777.9999******995666778*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MCFFTQRNHK YYLKGSRTKN SGHGYWKLAS QSEKPIKKAN CTIGFIRSLI YYRGNKTKHE 60 TKTDWIMYEY RVNTQLNYAD KLANSSATPP QSTNKLAEWV LCKVYNKNKM INKVQDAQVM 120 LEKPVVLEAV QDLEPEFPNS FIQDLVKELL TDSDPIALNE DQSEHYLIDN IPVLSGIYGN 180 ECIKLQANES STSSTAYNVP DHLIPAEEIN VITSRKSKSS NNEHRDFASE YFKGQFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	2e-17	NAC family protein