PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON89805.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 129aa    MW: 14897.3 Da    PI: 9.9153
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON89805.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.73.2e-16291101494
                 T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
          B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                 + l +p kf+e+h ++ +e + l+  + + ++W+v++   + ++++  l+ GW eF+ +n+L egD++vF+l+++ ++  l++
  PON89805.1  29 SFLHVPVKFVEKHLKNCREFIHLM-VHGKKQRWSVRCFPrKDSPSSKQLGHGWHEFAVDNNLVEGDVCVFELIKKgKDIALKI 110
                 66899********77766655555.4568899*****55444445588************************98656655555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MSTLLEAQIS KETEKAATVA NLHELENPSF LHVPVKFVEK HLKNCREFIH LMVHGKKQRW  60
SVRCFPRKDS PSSKQLGHGW HEFAVDNNLV EGDVCVFELI KKGKDIALKI WIYHAVDYAG  120
SAKKRYKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.18e-18B3 family protein