PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON89826.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family TCP
Protein Properties Length: 183aa    MW: 20438.3 Da    PI: 11.1806
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON89826.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP108.78.9e-3491243105
         TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssaseceaesssssasnsssg...... 88 
                 g+kdrhsk+ T++g+RdRRvRls++ a++f+dLqd+LG+d++sk++eWL++ a  ai el+++       +  ++      s+ s++s  + +      
  PON89826.1   9 GGKDRHSKVWTSKGLRDRRVRLSVTMAIQFYDLQDRLGYDQPSKAVEWLINVASDAIAELPSLnssfldtP--NS-----TSETSKGS--GLSlsrsei 98 
                 78*************************************************************44444221..11.....11111111..111222223 PP

         TCP  89 .........kaaksaakskksqksaa 105
                          +aa+++a+++++ +++ 
  PON89826.1  99 rvnrvkareRAARESATHREKAQKPC 124
                 34444444433333333333333333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MIVFYGVSGG KDRHSKVWTS KGLRDRRVRL SVTMAIQFYD LQDRLGYDQP SKAVEWLINV  60
ASDAIAELPS LNSSFLDTPN STSETSKGSG LSLSRSEIRV NRVKARERAA RESATHREKA  120
QKPCQELDTS RRTGSPSLSG RRHPTPPPRK TRKPSTPLVA PALRLKPSKN VIIPFSYPYF  180
SSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.11e-40TCP family protein