PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON89828.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 111aa    MW: 12162.7 Da    PI: 8.6834
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON89828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA44.22.6e-144177135
        GATA  1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
                C++Cg ++  Tp ++ gp g++tLCnaCGl+++ kg+
  PON89828.1 41 CQHCGISEqnTPAMHLGPAGPRTLCNACGLMWANKGT 77
                *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MHRKNGQFAS LKESSGTSGW DSSQSGLQAG THRPETVLRR CQHCGISEQN TPAMHLGPAG  60
PRTLCNACGL MWANKGTLRD LSKGERNLFA DHIEPLSGAD LIYRELQMSV R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.25e-23GATA family protein