PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON89959.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 261aa    MW: 29637.9 Da    PI: 4.8272
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON89959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.3e-0974117755
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++E r R+++N++  +Lr+l+P+ +      Kl+ a+iL +A+eY+k+Lq
  PON89959.1  74 AAEMRIRKKLNERVYTLRSLVPNiS------KLDRASILVEAIEYVKDLQ 117
                 679999*****************66......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MNLKQFRYSS ESRTRNNAAR FESSHDPSDK QMDSSVDAMQ ISSLLSDCSD QFDDDDDGKY  60
GRNSEKEPNC ENLAAEMRIR KKLNERVYTL RSLVPNISKL DRASILVEAI EYVKDLQRQV  120
KELQDELKED SNNDGLKNNG TNETSGNGSI SKQNQDWDTT NGKAPQMEPQ VEVAQIAGIE  180
FFVKVFREHE PGRLVRLMEA LNSQALEVTN ANVTTFKNLV SNVLRVEKDS KVVVQADQLR  240
DFLREHTRNP SEGLCEMSKV S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.13e-53bHLH family protein