PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON90035.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NAC
Protein Properties Length: 98aa    MW: 11148.2 Da    PI: 4.0294
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON90035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM224.5e-075697447
         NAM  4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL 47
                 +rF Ptdee v e   +k+++++l+  + i++v+ y++ P +L
  PON90035.1 56 FYRFYPTDEEFV-ELVLEKLNNQPLTP-NKIRDVEFYNCTPDEL 97
                58**********.77888999999888.77************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MEDCHDQLKK LGDAENPSSS SSSSNNNDQI PSWSLWSSSS SSSSGAMYIF DKLPLFYRFY  60
PTDEEFVELV LEKLNNQPLT PNKIRDVEFY NCTPDELA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.16e-06NAC family protein