PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON90299.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NF-YB

Protein Properties

Length: 200aa MW: 20723.9 Da PI: 6.9604

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON90299.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	185.8	3.4e-58	17	112	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfedyveplk+yl+k+re+egek PON90299.1 17 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQKFREMEGEK 112 89********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MADSDNDSGG PNSASPREQD RFLPIANVSR IMKKALPANA KISKDAKETV QECVSEFISF 60 ITGEASDKCQ REKRKTINGD DLLWAMTTLG FEDYVEPLKI YLQKFREMEG EKTAALGRGG 120 GGGLDSVSGG DTNALIGGGS GGGGGGGGGY GSSGGGGGMY GHSSGVQMMM MGQHQHIHHH 180 HHNMFGSSGG GSGTSTGRPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	6e-75	NF-YB family protein