PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON90305.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NF-YB
Protein Properties Length: 171aa    MW: 18828 Da    PI: 6.8849
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON90305.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB162.65.4e-51190897
       NF-YB  8 lPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                +Pianv+rim+k+lP +akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa+++lGf+dy+epl++yl++yre+eg++
  PON90305.1  1 MPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRETEGDR 90
                8***************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MPIANVIRIM RKILPPHAKI SDDAKETIQE CVSEYISFIT GEANERCQRE QRKTITAEDV  60
LWAMSKLGFD DYIEPLTLYL HRYRETEGDR ATIRGASSVD VNPFMKRPAV DYGASSALGV  120
AAFAPNTTTT SSFHVGHHHN GFFGYFKDSS GAGGSSNQAA VANGEQHGQF K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.28e-63NF-YB family protein