PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON90968.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TALE

Protein Properties

Length: 472aa MW: 52390.8 Da PI: 5.7677

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON90968.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.1	8.4e-10	394	431	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt++qV++WF N R + PON90968.1 394 FEHflHPYPNDSEKLMLASQTGLTKNQVSNWFINARVR 431 664459******************************88 PP
2	BELL	101	9.1e-33	256	327	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qe q k akL+slleeV+ rY++y++ql+ ++++F++vag g+ak+Yt+lAl+a+SrhF +L+dai+++i PON90968.1 256 EKQESQVKMAKLISLLEEVEGRYEKYYHQLEEIMAAFDMVAGSGAAKSYTALALQAMSRHFCSLRDAIVSRI 327 689*****************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MVSQDSPPHP DTNIVHQFLI SDNISTQTQF ENQHFNAYGS NFRGNNITFP PSLGALPSIQ 60 SLGERMSRSI DLVQPQTTAE ESQLSHTRRL MDLLGAANDT NHQAQRLSLS LGSHMLVPSV 120 EYRQRSFNSD LITPSYLISG EEEAREVCNP GLEHVNDNYP FSGTSLASSS ASLNRSYSTL 180 YGAESLATVI SHSRYLKPTQ SLLEEIVNVG GKAVEISNEK YVDMLLRGGR RGGGGALSLS 240 SELKAELCSS GIISAEKQES QVKMAKLISL LEEVEGRYEK YYHQLEEIMA AFDMVAGSGA 300 AKSYTALALQ AMSRHFCSLR DAIVSRINVE KRKLLQDLPK ISAGLSQLSL FDRETRNNRI 360 SLQQLGMIQS QRQAWRPIRG LPETSVAILR AWLFEHFLHP YPNDSEKLML ASQTGLTKNQ 420 VSNWFINARV RLWKPMIEEM YKEEFGDSSD DSNPLGGGGP MTGEGVTDHE ED

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MVSQDSPPHP DTNIVHQFLI SDNISTQTQF ENQHFNAYGS NFRGNNITFP PSLGALPSIQ  60
SLGERMSRSI DLVQPQTTAE ESQLSHTRRL MDLLGAANDT NHQAQRLSLS LGSHMLVPSV  120
EYRQRSFNSD LITPSYLISG EEEAREVCNP GLEHVNDNYP FSGTSLASSS ASLNRSYSTL  180
YGAESLATVI SHSRYLKPTQ SLLEEIVNVG GKAVEISNEK YVDMLLRGGR RGGGGALSLS  240
SELKAELCSS GIISAEKQES QVKMAKLISL LEEVEGRYEK YYHQLEEIMA AFDMVAGSGA  300
AKSYTALALQ AMSRHFCSLR DAIVSRINVE KRKLLQDLPK ISAGLSQLSL FDRETRNNRI  360
SLQQLGMIQS QRQAWRPIRG LPETSVAILR AWLFEHFLHP YPNDSEKLML ASQTGLTKNQ  420
VSNWFINARV RLWKPMIEEM YKEEFGDSSD DSNPLGGGGP MTGEGVTDHE ED

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	235	GGRRGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	1e-101	TALE family protein