PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON91103.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 261aa    MW: 27546.6 Da    PI: 8.6021
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON91103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.0004494116123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC+ C+k F++   L  H  +H
  PON91103.1  94 YKCSVCSKAFPSYQALGGHKASH 116
                 9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MALEALNSPT TATAPFHFED AANLHYLEPW AKRKRSKRSR LDQAAPTEEE YLALCLIMLA  60
RGGADQRQKL TPTRAPPVDK TATTGTTSAT KLSYKCSVCS KAFPSYQALG GHKASHRKGT  120
GGVEDQPTSS TTTTTTSAAA GAGASNGSGR AHECSICHKT FPTGQALGGH KRCHYEGGAA  180
SASANAAAAN SALTTTSEGV GSTSHTAFSQ SHRNFDLNLP ALPEFSRDFF VSGDDEVESP  240
HPLKKIRLSI SPPKIEIAEH H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-63C2H2 family protein