PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON91106.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 392aa    MW: 43009.4 Da    PI: 4.7146
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON91106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.8e-103183581055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  PON91106.1 318 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 358
                 9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    
MESAGAFPDG DWMFSAEDLE LTPHFLGQCS FFPSNNINVE GSFNFGQSIP VYQNLSEVGG  60
VMSTIPHESL LFHTLDSLNS SLQYLSQESS CYSSSNSGTS IGGVFTTSQD NNYVNYNYSD  120
SYDHDVNPVT HNNISNGISM PIFLMGEKNI INHESPCHVP SVSDTVILGE ENTTMICNTI  180
KEDNSGNGND NDNDDNALQP ETSVVSGKES LLKRTYNVVD KVSPKKKPRV SRDVQKGKKN  240
LKSQKVGPNG KEEEMSINNG VEGHSSSSYS SEDDNASQEN TNGGETSDAK SLSGAVNLNG  300
KARASRGSAT DPQSLYARKR RERINERLRI LQNLVPNGTK VDISTMLEEA VHYVKFLQLQ  360
IKLLSSDDMW MYAPIAYNGM DIGLQQKISQ LV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.13e-45bHLH family protein