PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON91147.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 371aa    MW: 39671.6 Da    PI: 6.8508
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON91147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.95.5e-30186244259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver++ dp ++++tY+ eHnh+
  PON91147.1 186 SDIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERNRVDPGMFIVTYTAEHNHP 244
                 79*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MDDDWDLQAV VRGCSIAGAG AGAASTTTAT STTSSSVFMA DFQAVSTTSS SSSLFSSSYS  60
PFGFSQHHGS SGQLFLLPDP NNFRPRNVVV EELHELYKPF FPKSQTHIQI QTQTQTPLSS  120
LSSICSSSTA STITTTRSND QIRQLKQAHQ PTKQSLNNAS STTPRSKKRK NQLKKVCQVP  180
AESLSSDIWA WRKYGQKPIK GSPYPRGYYR CSSSKGCLAR KQVERNRVDP GMFIVTYTAE  240
HNHPAPTHRN SLAGSTRQKP STPQSISGAA GEPNNPATKP SSPATSGEEE LAVPQAHSTT  300
TESKDGPESV LMDDDDEDEL GFSDMAVSDD FFVGLEGLGG PATGDVFSDH FSSSFPLSWV  360
ANNAATAASG G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-76WRKY family protein