PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91393.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 168aa MW: 19265.8 Da PI: 9.6427

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.9	8.9e-09	58	105	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + k + a +L ++ Y++sLq PON91393.1 58 SHSLAERVRREKINERLKCLQTLVPGC----YKTMGMAVMLDVVISYVHSLQ 105 8*************************8....345778888888888888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MNFMTNNINI RSCFQFDDPN TSKTEKGTGR RKRKRNQSKD AAEEVIHVRA KRGQATDSHS 60 LAERVRREKI NERLKCLQTL VPGCYKTMGM AVMLDVVISY VHSLQNQIEF LSMKLSAASM 120 YYDSNSPNPN AINKLQVRNN AVNVEQEIDE NIENLGREGY GGFSYHFR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	37	GRRKRKRNQ
2	30	35	RRKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25330.1	1e-48	bHLH family protein