PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON91394.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB
Protein Properties Length: 326aa    MW: 37036.5 Da    PI: 6.1794
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON91394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.53e-182067148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd ll++++ ++G g+W++ a++ g++Rt+k+c++rw++yl
       PON91394.1 20 RGPWTLEEDTLLIHYISRHGEGHWNLLAKRAGLKRTGKSCRLRWLNYL 67
                     89********************************************97 PP
2Myb_DNA-binding52.51.2e-1673116146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
       PON91394.1  73 RGNLTPQEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 116
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MPMHSSITKC HNEEETELRR GPWTLEEDTL LIHYISRHGE GHWNLLAKRA GLKRTGKSCR  60
LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK  120
QARQLNIESN SKRFLEAVRR FWMPRLLQKV EQNSSTSSSL SPDSFTTIQN GQNSSVDLSP  180
LPPDSTTSLL PYSTLSAPTT PKPTKTTAYG SYYSNGCLSS VLTDQTILSS PQITSPDSEQ  240
LKTTPSSVSD KAVNDNQFWD LGCVDHDHYE VVSCSHGIEG LNLDPILEFE AFDISELDCQ  300
MAAGDWVLDD NVADALWNNM GEMCWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.13e-83MYB family protein