PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91436.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

ARR-B

Protein Properties

Length: 587aa MW: 65828.4 Da PI: 5.7629

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91436.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77	2.4e-24	198	251	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl PON91436.1 198 KARVVWSVDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 251 68*****************.9*****************************8 PP
2	Myb_DNA-binding	38.5	2.8e-12	200	250	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ PON91436.1 200 RVVWSVDLHQKFVKAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 250 678***********************************************7 PP
3	Response_reg	79.5	1.2e-26	19	127	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ ++l+++l+k y ev+++ +++al+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga PON91436.1 19 VLVVDDDPTWIKILEKMLKKCSY-EVTTCGLATDALRLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGAC 113 89*******************.***********999999******************6644.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ ++el + PON91436.1 114 DYLLKPIRMKELKN 127 ********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MENGFSSPRN DTFPAGLRVL VVDDDPTWIK ILEKMLKKCS YEVTTCGLAT DALRLLRERK 60 DGFDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI 120 RMKELKNIWQ HVFRKKIHEI RDIESHESIE GILTRHGSDH SDDGHFLSME DLTSVKKRKD 180 VENKHDDKDY SDASSTKKAR VVWSVDLHQK FVKAVNQIGF DKVGPKKILD LMNVPWLTRE 240 NVASHLQKYR LYLSRLQKEK ENEAKIPFGG IKHTDVSPKD PPVSFGLQNS TNIHQSDVLN 300 GSYRISGNNL LVQNVDPSSH EDDLRSIVSE PVVEAKGPAV NVPDCQKAKS SQMGFKHSFS 360 PLESEVKFAA FESSIPAKYS WGEVSEIQFR QEQKPLIHLE NGFNKLPPPD PLHQVPVDPI 420 QSISSISSKP SIAERVLSGP VKSKPPYPEY GGDQVSHVSP DISSIDSLPL TSKCHMVNHQ 480 AFEPIYTTTS TLTTQGSHMS CTADLESAQK NFVFGNVSSL ASFDDDLQVL FQGEYFGDGV 540 RNVGFSDYID PWLINEVPAH LYDSLRFGYE NAYDPTECAI IDQSLLT

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MENGFSSPRN DTFPAGLRVL VVDDDPTWIK ILEKMLKKCS YEVTTCGLAT DALRLLRERK  60
DGFDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI  120
RMKELKNIWQ HVFRKKIHEI RDIESHESIE GILTRHGSDH SDDGHFLSME DLTSVKKRKD  180
VENKHDDKDY SDASSTKKAR VVWSVDLHQK FVKAVNQIGF DKVGPKKILD LMNVPWLTRE  240
NVASHLQKYR LYLSRLQKEK ENEAKIPFGG IKHTDVSPKD PPVSFGLQNS TNIHQSDVLN  300
GSYRISGNNL LVQNVDPSSH EDDLRSIVSE PVVEAKGPAV NVPDCQKAKS SQMGFKHSFS  360
PLESEVKFAA FESSIPAKYS WGEVSEIQFR QEQKPLIHLE NGFNKLPPPD PLHQVPVDPI  420
QSISSISSKP SIAERVLSGP VKSKPPYPEY GGDQVSHVSP DISSIDSLPL TSKCHMVNHQ  480
AFEPIYTTTS TLTTQGSHMS CTADLESAQK NFVFGNVSSL ASFDDDLQVL FQGEYFGDGV  540
RNVGFSDYID PWLINEVPAH LYDSLRFGYE NAYDPTECAI IDQSLLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-134	ARR-B family protein