PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON91811.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 231aa    MW: 26190.8 Da    PI: 6.6683
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON91811.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.61.7e-1173120455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i++++  L++l+P +    +k   Ka+iL + ++Y+++Lq
  PON91811.1  73 SHSLAERARREKIRERLLFLQSLVPGC----DKITGKAQILDQIIKYVQELQ 120
                 8*************************9....899*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MEKRKKIMIA KEEGEDKGKN KQKKPNGSFT NPEEKRTELP QVKKDKEIKS EHNEESPAGY  60
VHVRARRGQA TDSHSLAERA RREKIRERLL FLQSLVPGCD KITGKAQILD QIIKYVQELQ  120
NQVECLAAML ASVNSTIDFE VDPFMGTQAP NQVHWKCCLE PPFPTVLDST SFPQFMFTPT  180
PTPTPTPTPT SASLVLKEDQ ESTGDRELFS GQDDQSQKLP IQCLHDFCMN F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26260.31e-29bHLH family protein