PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91855.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TCP

Protein Properties

Length: 257aa MW: 27290.3 Da PI: 10.166

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.4	5.1e-38	37	123	2	88
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 a+k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d+ ti+WLlqqa+p+i+++tgt++++as+ +++s+s+++n s + PON91855.1 37 APKRSSSKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKSDGDTIQWLLQQAEPSIIAATGTGTIPASALaASGASVSEQGN-SVS 123 789******************************************************************888533344444332.222 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MAENKPAEIK DFQIMIANKD DTNNNNNNNN NNKKQLAPKR SSSKDRHKKV DGRGRRIRMP 60 ALCAARVFQL TRELGHKSDG DTIQWLLQQA EPSIIAATGT GTIPASALAA SGASVSEQGN 120 SVSSGLHSKM DVGRSHGVWP AISGIGSGFV QNSGQSTPSF AAENLNYLPK FGIHGFEFPG 180 MNLGSMSFPA IMGGGGNQQV PGLELGLSQD GHIRVLNSQT LVQFQQQAGQ RSVGGGGGDS 240 LVPRQQQSPE KDDSQSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	7e-65	TCP family protein