PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON92211.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 270aa    MW: 30854.9 Da    PI: 9.9541
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON92211.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.71e-13492197
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                ffk+    +  ++ +l lpkkf+  hg  ++    + l+ + g++We+ l   k+ g+++l++GW +F k  +L+ g  + F+++g+s f   v+++
  PON92211.1  4 FFKII--LMEDSKMQLDLPKKFVLLHG--EALCNVVFLKLPCGQQWEIGL--LKSHGKVYLQQGWPKFTKHYRLDYGHLLFFRYEGKSLF--SVSIC 92
                66777..67778889********9998..44777899999**********..********************************998777..77777 PP
2B352.21.1e-16177269198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ffk+ ++ + ++  +l+lp kf++ h +kk++   ++  +   + W+vkl   ++ +++++++GW++F  an L+ gDf+v +l++++e  l+v++f+
  PON92211.1 177 FFKKVVRDHPSACYNLRLPDKFVNGHIEKKTQ--IIK-LQVGAKHWDVKL--LRCESGFFFSGGWSKFLAANFLRPGDFCVYELIKSNEVVLKVSMFK 269
                 788888888888888********877545444..455.44588*******..9********************************9888878888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MFEFFKIILM EDSKMQLDLP KKFVLLHGEA LCNVVFLKLP CGQQWEIGLL KSHGKVYLQQ  60
GWPKFTKHYR LDYGHLLFFR YEGKSLFSVS ICGLSTCEID YLSIPAPSDG NLGVPIREQT  120
EEDDSVLPPT SPAHQRMRSS GSGKLRKSKK GIRGTYKSYR DSRAFAEASS FSSSNPFFKK  180
VVRDHPSACY NLRLPDKFVN GHIEKKTQII KLQVGAKHWD VKLLRCESGF FFSGGWSKFL  240
AANFLRPGDF CVYELIKSNE VVLKVSMFKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-18B3 family protein