PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON92239.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Trihelix
Protein Properties Length: 305aa    MW: 36455.8 Da    PI: 7.8492
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON92239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix84.51.4e-2653135186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+ qe+++L+ +r e+++++ ++k++k lWe ++ km+e+gf+rsp+qCk+kw+nl +ryk ++++e +   ++++++p++++l+
  PON92239.1  53 QWSLQETKELLIIRAELDQTFMETKRNKLLWEVIATKMKEKGFNRSPEQCKCKWKNLVTRYKGCETMEPE---TVRQQFPFYNELQ 135
                 7********************************************************************8...47788******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEGHHHHQNL HHHHHQHHQQ QQQFHHHHQQ QQQHHQPNPN ISVSVDVTDR FPQWSLQETK  60
ELLIIRAELD QTFMETKRNK LLWEVIATKM KEKGFNRSPE QCKCKWKNLV TRYKGCETME  120
PETVRQQFPF YNELQAIFAA RMQRMLWAEA EGGSSSKKKA VISSDDEEDN DEISEGEQKG  180
NTTTSSTVSR NKKKKLLKSS NNNLGSGGSS SGVSNNLREI LEDFMKQQMQ IETQWREAFE  240
AREEERRLKE MEWRQTMEAL ENERLLMERR WREREEQRRM REDARAEKRD ALITALLNKL  300
RREDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.16e-58Trihelix family protein