PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON92291.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 470aa MW: 48358.7 Da PI: 6.1279

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON92291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.9	6.6e-12	272	317	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq PON92291.1 272 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 317 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MQPCSREMQG NNINSLISLQ DLQNQSSSSS ASIQASAAHH FEQGPAHDDF LEQMLSTLGQ 60 QQPSWADLGP HGGGGGAAAA NAKAPWETLK PRDLSDETAP SGHENVAFPY DESVNLASKF 120 RNHQISGGGG GGSKSAAAAA AAATMMLQQQ LMMARGLAGA GGSGEAGLMP MPLSLSNGDF 180 DRSQNDVVDG SSFKSPNPGG DGSVQALFNG FAGSLPGSGQ APNQFHHPQA PNFGPSGTAM 240 NQTPAPSGSS GAAPAQPRPR VRARRGQATD PHSIAERLRR ERIAERMKAL QELVPNANKT 300 DKASMLDEII DYVKFLQLQV KVLSMSRLGG AAAVAPLVAD MSSEGGGDCI QANTTPGALG 360 RTSNGNQTAS SNDTMTVTEH QVAKLMEEDM GSAMQYLQGK GLCLMPISLA TAISTATCHT 420 RNPLINNPAM ASNGEGPSSP SMSVLTVQSA TMGNGNADGS VKDAASVSKP

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MQPCSREMQG NNINSLISLQ DLQNQSSSSS ASIQASAAHH FEQGPAHDDF LEQMLSTLGQ  60
QQPSWADLGP HGGGGGAAAA NAKAPWETLK PRDLSDETAP SGHENVAFPY DESVNLASKF  120
RNHQISGGGG GGSKSAAAAA AAATMMLQQQ LMMARGLAGA GGSGEAGLMP MPLSLSNGDF  180
DRSQNDVVDG SSFKSPNPGG DGSVQALFNG FAGSLPGSGQ APNQFHHPQA PNFGPSGTAM  240
NQTPAPSGSS GAAPAQPRPR VRARRGQATD PHSIAERLRR ERIAERMKAL QELVPNANKT  300
DKASMLDEII DYVKFLQLQV KVLSMSRLGG AAAVAPLVAD MSSEGGGDCI QANTTPGALG  360
RTSNGNQTAS SNDTMTVTEH QVAKLMEEDM GSAMQYLQGK GLCLMPISLA TAISTATCHT  420
RNPLINNPAM ASNGEGPSSP SMSVLTVQSA TMGNGNADGS VKDAASVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	282	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-66	bHLH family protein