PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON92331.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 213aa MW: 24487.1 Da PI: 9.3908

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON92331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30	9.1e-10	60	113	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++ hn+ Er+RR ++ +++ L +llP++s++++k+ + i+ k+ ++I +L PON92331.1 60 KKQDHNAKERQRRMKLSESYLALGSLLPPNSRPSKKRWTAPVIVDKVLHFIPEL 113 6899***********************86555555*******99999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MEYSNSIVDQ QNFTTDNFSA GKVFSSKLAK ERKSIKSKHL EKTDKKLTVQ SEVEEESYVK 60 KQDHNAKERQ RRMKLSESYL ALGSLLPPNS RPSKKRWTAP VIVDKVLHFI PELENEIEQL 120 TLKKKNMQSA LENMASVINK KSINSELNSL TISVNEVKKG ELILQICRQR DGKNIFSRLL 180 KNIEEEGICI VSASTLRVCD ERECYNIHIQ DMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71200.1	2e-29	bHLH family protein