PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON92337.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 231aa MW: 26505.5 Da PI: 9.4603

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON92337.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.6	1.2e-09	54	106	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54 +++ hn+ Er RR +i +++ L +llP + p kK + i+ k+ eYI +L PON92337.1 54 KKQDHNAKERIRRMKISESYVALGSLLPIsR---PLKKrWTAPVIVDKVLEYIPKL 106 6899***********************66...55555************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MFIEHENSIV INPSTRKGFS STTKERKTKP RQNLETIDKN RTVHSEVEEN TFFKKQDHNA 60 KERIRRMKIS ESYVALGSLL PISRPLKKRW TAPVIVDKVL EYIPKLENEI EQLTIKKNNM 120 LSAIENVPSL INKKSINPKV DSLTVSVNKV KEGQLIFQIC RQGDGKNNVF SSLLRCIEKE 180 EGICLVSAST LHVCDERECY HIHIEMNENS NSINGADSSM VLKEKVISWL R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71200.1	5e-30	bHLH family protein