PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON92360.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 231aa    MW: 26151.7 Da    PI: 9.8819
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON92360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.10.00018163215254
                 HHHHHHHHHHHH.HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   2 rrahnerErrRR.driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 rra   r ++R  d++ +++++Lr+llP  +  + ++  +  e L+++  YI+ L
  PON92360.1 163 RRARRGRAKKREdDNVDDRLAQLRTLLPGgN--EIHGDYENHELLTEVASYISCL 215
                 5556666666652689*************77..999****************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MRVYSLETNK LLHLAFSTNY VSHLVPALKK IRMINSEGST SSSTNNDKNG NNELAKVVRF  60
EVDMAMALSV KEYNFAWSHA LETKLNQRHI TVNIVNGGNN FTRNSSFNQI SFTNHKKMET  120
TAIVEKKAGE NSALFLDNPA SPNLRPYDLK MIMINKTAGR SRRRARRGRA KKREDDNVDD  180
RLAQLRTLLP GGNEIHGDYE NHELLTEVAS YISCLKLQVK VLQCLVEIGD E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166174RRGRAKKRE