PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON92714.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 244aa    MW: 27576.8 Da    PI: 8.8463
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON92714.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.9e-1757105355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + GVr+++ +grWvAeI+d    +++ r +lg+f+t+e+Aa a+++a++ l+g
  PON92714.1  57 FLGVRQRP-SGRWVAEIKDS---NQKLRLWLGTFDTPEDAALAYDRAARLLRG 105
                 67******.7*********3...246***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MDILEISSNI PSDSQNPISN YSKEPNIEPE KFHESGDNSS KLPKRSILLK NKGPRRFLGV  60
RQRPSGRWVA EIKDSNQKLR LWLGTFDTPE DAALAYDRAA RLLRGRNAKT NFPNLGIMTT  120
YEENFSILGK NNPRLYRLLQ QAVMKNKVKN NYCNINIPIW NSKDRNMGEE YLNSSVGNDF  180
ETLVEETIVC SSSSYEDDHR GDQDQRDNKK NSNRLCSSTA ISLGSSKVYS SVVVAPSFSA  240
SDQC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-18ERF family protein