PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON92795.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HD-ZIP

Protein Properties

Length: 198aa MW: 22615.1 Da PI: 7.2969

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON92795.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.7	2.7e-20	9	63	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +f++eq++ Le +F++++ p +++++LA +lgL+ rqV +WFqNrRa+ + PON92795.1 9 KNKKRFSDEQIKSLEVMFRSDSRPESRTKQQLAGELGLQPRQVAIWFQNRRARSR 63 56789************************************************98 PP
2	HD-ZIP_I/II	111.5	5.7e-36	10	101	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+r+s+eq+k+LE +F+++++ e++ K++la eLglqprqva+WFqnrRAR +tkq+E++y++Lk++y++l+++ e+L++e+++L+ +l+e PON92795.1 10 NKKRFSDEQIKSLEVMFRSDSRPESRTKQQLAGELGLQPRQVAIWFQNRRARSRTKQIEREYSKLKASYNTLVSSVESLKRENQALNIQLQE 101 79*************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MNTLTCGGKN KKRFSDEQIK SLEVMFRSDS RPESRTKQQL AGELGLQPRQ VAIWFQNRRA 60 RSRTKQIERE YSKLKASYNT LVSSVESLKR ENQALNIQLQ EAKTVLRKDQ GSGSLESDET 120 GNGRENPFES KDVRSQNLLQ SCKREVEVHH ENVGKEAEFL DLAPSADGSL TSSVDWRGFE 180 SGCYVDESSC SPWWEFWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	5e-43	HD-ZIP family protein