PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON92954.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family YABBY
Protein Properties Length: 96aa    MW: 10956.4 Da    PI: 10.2278
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON92954.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY121.51.3e-37860118170
       YABBY 118 PPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                  PekrqrvPsaynrfik+eiqrik+ nPdishreafsaaaknWahfP+ihfgl
  PON92954.1   8 APEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGL 60 
                 5**************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MYVLSTPAPE KRQRVPSAYN RFIKDEIQRI KSVNPDISHR EAFSAAAKNW AHFPHIHFGL  60
MPDQSGKRTN VRQQEGEVMM KDGFFASANH VGVSPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.13e-45YABBY family protein