PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON93375.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 195aa    MW: 22053.6 Da    PI: 10.3811
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON93375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.7e-091764655
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                + +E++RR +++   ++L +l+P++   +sk  l+  + L +A  YI +L+
  PON93375.1 17 KTVEKNRRIQMKGLCFKLASLIPSR---HSKEmLTQQDQLALAASYITHLR 64
                679*********************8...77777****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MKKISSPTES TSKLDRKTVE KNRRIQMKGL CFKLASLIPS RHSKEMLTQQ DQLALAASYI  60
THLRERVEKL KARKEQAMKE HHPPPSTSRG SNKGRNDVVF DHTTRPIGSS STKLPMIELK  120
DLGCGIELVL ISGLRKNFML YEVISVLEEE GAEVVSASFS VVDAKIFHTL HAQVKLSRVG  180
VETSRVWQRL QDLIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.17e-31bHLH family protein