PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON93387.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 223aa MW: 25095.4 Da PI: 9.4442

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON93387.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.4e-16	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd++l+d ++ +G g+W++ ar+ g++R++k+c++rw +yl PON93387.1 9 RGLWTAEEDKILLDHIRVHGRGNWNRTARETGLKRCGKSCRLRWMNYL 56 788*******************************************97 PP
2	Myb_DNA-binding	54.6	2.4e-17	62	106	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +++ E++l+++++k+lG++ W++Ia +++ gRt++q+k++w++ PON93387.1 62 RGDFSEAEEDLIIRLHKLLGNR-WSLIAGRVP-GRTDNQVKNHWNTC 106 899*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MKAENENKRG LWTAEEDKIL LDHIRVHGRG NWNRTARETG LKRCGKSCRL RWMNYLSPSV 60 KRGDFSEAEE DLIIRLHKLL GNRWSLIAGR VPGRTDNQVK NHWNTCLSKK LGIKKGKSKV 120 VGMKNVTQSL SGELDKKVCT PSGPYLSELP NNTSEAQGNK VIKDGSQSPP GFMRGQGEVE 180 MSDNYDSPFL FSSIADDFIN PASFYFMEPP DEPSLGFVWN SGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	1e-61	MYB family protein