PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON93564.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 356aa MW: 40184.5 Da PI: 9.0759

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON93564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180	6.1e-56	16	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL kkv ++++ + ++i evd++k+ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ +++l PON93564.1 16 LPPGFRFHPTDEELISHYLYKKVVNTNFCC-RAIGEVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR-GKSL 112 79***********************999.89***********888999*************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfykgrapkgek++Wvmheyrle PON93564.1 113 VGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 142 ****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MENVLGQVKE DEQLDLPPGF RFHPTDEELI SHYLYKKVVN TNFCCRAIGE VDLNKSEPWD 60 LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIYRGK SLVGMKKTLV 120 FYKGRAPKGE KSNWVMHEYR LEGKFSIHNL PKTAKNEWVI CRVFQKSSGG KKIPITGLNR 180 LTPFGNEMGS FGLPPLMDSS SPYSTKSKPV VPQSVNVPCF SNPMNVQRNQ DETMVDSITN 240 SLYGAVSNTN VIPTATTTIP LLNSLYSAQN CVVSSSSASA SMQFPSNSVM VHQNSSNDQS 300 ILRALLENNG SNLRQSFKTE RDNTEISSVM ANLEMGRRQF GDQALPHADI ESFWNY

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MENVLGQVKE DEQLDLPPGF RFHPTDEELI SHYLYKKVVN TNFCCRAIGE VDLNKSEPWD  60
LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIYRGK SLVGMKKTLV  120
FYKGRAPKGE KSNWVMHEYR LEGKFSIHNL PKTAKNEWVI CRVFQKSSGG KKIPITGLNR  180
LTPFGNEMGS FGLPPLMDSS SPYSTKSKPV VPQSVNVPCF SNPMNVQRNQ DETMVDSITN  240
SLYGAVSNTN VIPTATTTIP LLNSLYSAQN CVVSSSSASA SMQFPSNSVM VHQNSSNDQS  300
ILRALLENNG SNLRQSFKTE RDNTEISSVM ANLEMGRRQF GDQALPHADI ESFWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-136	NAC family protein