PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON93593.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ZF-HD
Protein Properties Length: 94aa    MW: 10318.5 Da    PI: 8.1243
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON93593.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer106.51.6e-332986260
  ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                 ++vrY eC+kNhAa++Gg+avDGC+Efm+s geegt +al CaACgCHRnFHRre+e+e
   PON93593.1 29 STVRYGECQKNHAANIGGYAVDGCREFMAS-GEEGTNEALLCAACGCHRNFHRREEENE 86
                 689**************************9.999*********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MKKRQVVVKR DKSSTGRSSS TISSSVVRST VRYGECQKNH AANIGGYAVD GCREFMASGE  60
EGTNEALLCA ACGCHRNFHR REEENEVVCE YSPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.13e-25ZF-HD family protein