PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON93629.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

bHLH

Protein Properties

Length: 279aa MW: 31420.5 Da PI: 5.2899

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON93629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.9	1.3e-06	92	141	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 rr+ ++erE++ R+++N+ f+eL + + ++ + Ka+iL +A + +k+L PON93629.1 92 RRVHKSEREKQKREHLNELFFELSSAIELK----QPNNGKASILCEASRLLKDL 141 7999***********************996....56788899999988888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MAWRREREVT CGAHVTEYFL NLLDPVYLIL LVIGLVLAEN FDPEEFRTGL EFNYTKMGSE 60 DAVPLADQVN VAVEDSADQD YPGKKNKSKV PRRVHKSERE KQKREHLNEL FFELSSAIEL 120 KQPNNGKASI LCEASRLLKD LLAQIEGLRK ENASLLSESH YVTVEKNELK EENSTLETQI 180 GRLQSELEAR VLHSKPDLNA PPPECLAMPA DEPSLGQPHT VIVVPLIPDA SQLPSNPPTS 240 NVSKPHARYP TSADSWTSQL LREQQPKAGK ELLKDRNRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.2	1e-58	bHLH family protein