PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON93636.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 87aa    MW: 9791.98 Da    PI: 4.5205
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON93636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.21.3e-0718561454
                HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                d+iN+   +L+ llP  +   +s+    ++iLe+++ YIk+L
  PON93636.1 18 DEINELVLKLQALLPLlN---QSPNAPASTILEETCTYIKNL 56
                68**************55...9999***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MSNQSSSSRS SSFKPTDDEI NELVLKLQAL LPLLNQSPNA PASTILEETC TYIKNLRREV  60
DNLSGRLSQL LDSAEINDVE LIRRFQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.12e-12bHLH family protein