PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON93998.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family G2-like
Protein Properties Length: 96aa    MW: 10794.7 Da    PI: 8.5129
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON93998.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like39.11.7e-126992225
     G2-like  2 prlrWtpeLHerFveaveqLGGse 25
                prlrWtp+LH rFv+ave+LGG+e
  PON93998.1 69 PRLRWTPDLHFRFVHAVERLGGQE 92
                8*********************97 PP
2Myb_DNA-binding24.56.3e-087091122
                     TSSS-HHHHHHHHHHHHHTTTT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg 22
                     r+rWT++++ ++v+av++lGg 
       PON93998.1 70 RLRWTPDLHFRFVHAVERLGGQ 91
                     89******************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MKDRRSDSEC SKTSFSNQND QLGSESGENE DESRPKNNNG GLSSSNSTVE ESDKVKSSSV  60
RPYVRSKMPR LRWTPDLHFR FVHAVERLGG QESKSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-16G2-like family protein