PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON94010.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NF-YB

Protein Properties

Length: 231aa MW: 25268.1 Da PI: 4.9037

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON94010.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	169.4	4.2e-53	62	158	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 vreqd+++Pianv+rim+++lP++akis+daket+qecvse+isf+t+ea+d+cqre+rkt++++d+lwa+a+lGf+dyvepl+++l++yre e+++ PON94010.1 62 VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANDRCQREQRKTVTAEDVLWAMAKLGFDDYVEPLTLFLTRYRESETDR 158 69********************************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MLNLIIVNAS ILQFVTHVYI YYISAALGTV VANNNNSNDN NAGGDGENAG GTGERVRGAC 60 VVREQDQYMP IANVIRIMRR ILPSHAKISD DAKETIQECV SEYISFITGE ANDRCQREQR 120 KTVTAEDVLW AMAKLGFDDY VEPLTLFLTR YRESETDRTS LRSEPFVKRS SAIDQFGHPG 180 PYGPAFQLGP YPPGMFDPAG GYFRDGSGPT GGGSSSQNGG LGSYDPFGQY K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	3e-66	NF-YB family protein